) :Ĭannot open: HTTP status was '404 Not Found' In download.file(p, destfile, method, mode = "wb". While some others, like arulesViz, fail due to a wrong URL provided (it should be, since 1.0-4 is not the current version): scripts]$ Rscript -verbose -e 'install.packages("",repos=NULL,dependencies=TRUE,lib="/u01/app/oracle/product/12.1.0.2/dbhome_1/R/library",type="source")'Įrror in download.file(p, destfile, method, mode = "wb". Installation of package ‘/tmp/Rtmp6BgT76/downloaded_packages/igraph_1.0.1.tar.gz’ had non-zero exit status '/usr/lib64/R/bin/R -slave -no-restore -e install.packages("",repos=NULL,dependencies=TRUE,lib="/u01/app/oracle/product/12.1.0.2/dbhome_1/R/library",type="source")'Ĭontent type 'application/x-gzip' length 3328353 bytes (3.2 MB)ĮRROR: dependencies ‘magrittr’, ‘NMF’, ‘irlba’ are not available for package ‘igraph’ Some, like package igraph, fail to install due to missing dependencies: scripts]$ Rscript -verbose -e 'install.packages("",repos=NULL,dependencies=TRUE,lib="/u01/app/oracle/product/12.1.0.2/dbhome_1/R/library",type="source")' This, in turn, has implications on the dependent packages – in this case arulesViz, which depends on arules and it is included in the additional packages to be installed.Īnyway, whatever the reason, the net result of this change is that the majority of the 28 packages simply fail to install, for two different reasons. Nevertheless, the fact that now ORD is in version 3.2.0 seems to have not been taken into account here: in the VM, ORD still ships with an older version of the package arules (1.1-9), despite the fact that the latest arules version (1.3-1 at the time of writing) is indeed supported by R 3.2.0. I suspect that the reason for this change is a kind of version control for the packages to be installed, since in the past there have been some issues, mainly due to the fact that Oracle R Distribution (ORD), lagging behind the latest version of GNU R, was sometimes incompatible with the latest versions of some R packages (package arules was such an example). the packages are now referenced down to specific file names (including versions), with the argument repos being now NULL instead of "". The respective command now is Rscript -verbose -e 'install.packages("",repos=NULL,dependencies=TRUE,lib="/u01/app/oracle/product/12.1.0.2/dbhome_1/R/library",type="source")' Consider for example the package igraph while in the previous VM versions, the command in the script was Rscript -verbose -e 'install.packages("igraph",repos="",dependencies=TRUE,lib="/u01/app/oracle/product/12.1.0.2/dbhome_1/R/library")' Unfortunately, what has also changed is the form of the commands issued for installing these additional packages. 28 packages without counting their dependencies (the respective number in version 4.2.1 was only 10). In the just-released version 4.4.0 of Oracle Big Data Lite VM, as in the previous one ( 4.3.0.1), there is a rather large number of additional R packages to be installed by the provided script install_additional_packages.sh, i.e.
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